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Published in bioRxiv, 2023
Authors: Sheng Liu, Jianwei Chen, Jonas Hellgoth, Lucas-Raphael Müller, Boris Ferdman, Christian Karras, Dafei Xiao, Keith A. Lidke, Rainer Heintzmann, Yoav Shechtman, Yiming Li&Jonas Ries(2023). "Universal inverse modelling of point spread functions for SMLM localization and microscope characterization " bioRxiv.
Published in bioRxiv, 2023
Authors: M Li, W Shi, S Liu, S Fu, Y Fei, L Zhou, Y Li(2023). "Fast and universal single molecule localization using multi-dimensional point spread functions " bioRxiv.
Published in Optics Express, 2023
Authors: H Chang, S Fu, Y Li(2023). "Optimal Sampling Rate for 3D Single Molecule Localization " Optics Express
Published in Clinical and Translational Medicine, 2023
Authors: W Shi, S Fu, Y Li(2023). "High‐throughput single‐molecule localization microscopy: Potential clinical applications " Clinical and Translational Medicine
Published in Nature methods, 2023
Authors: Shuang Fu, Wei Shi, Tingdan Luo, Yingchuan He, Lulu Zhou, Jie Yang, Zhichao Yang, Jiadong Liu, Xiaotian Liu, Zhiyong Guo, Chengyu Yang, Chao Liu, Zhen-li Huang, Jonas Ries, Mingjie Zhang, Peng Xi, Dayong Jin & Yiming Li(2023). "Field dependent deep learning enables high-throughput whole-cell 3D super-resolution imaging " Nature methods
Published in Chinese Optics, 2022
Authors: LI Meng-fan, CHEN Jian-wei, SHI Wei, FU Shuang, LI Yun-ze, LUO Ting-dan, CHEN Jun-fan, LI Yi-ming.(2022). "Advances in multi-dimensional single molecule imaging " Chinese Optics
Published in Nature Communication, 2022
Authors: Li Y,Shi W,Liu S,Cavka I,Wu Y,Matti U,Wu D,Koehler S,Ries J (2022). "Global fitting for high-accuracy multi-channel single-molecule localization " Nature Communication
Published in Nature Communications, 2022
Authors: Robin Diekmann, Joran Deschamps, Yiming Li, Takahiro Deguchi, Aline Tschanz, Maurice Kahnwald, Ulf Matti & Jonas Ries (2022). "Photon-free (s)CMOS camera characterization for artifact reduction in high- and super-resolution microscopy " Nature Communications. 13(1).
Published in Journal of Cell Biology, 2022
Authors: Mingming ,Ji Meng Li , Long Sun , Hongyu Zhao, Ying Li, Lulu Zhou, Zhenni Yang, Xin Zhao, Wenyan Qu, Hanbing Xue, Ze Zheng, Yiming Li, Hongyu Deng, Yan G. Zhao (2022). "VMP1 and TMEM41B are essential for DMV formation during β-coronavirus infection " Journal of Cell Biology. 221(6).
Published in Optics Letters, 2022
Authors: Fu S, Li M, Zhou L, He Y, Liu X, Hao X, Li Y (2022). "Deformable mirror based optimal PSF engineering for 3D super-resolution imaging " Optics Letters. 47(12).
Published in Optics Letters, 2022
Authors: Chen J, Yao B, Yang Z, Shi W, Luo T, Xi P, Jin D, Li Y (2022). "Ratiometric 4Pi single-molecule localization with optimal resolution and color assignment " Optics Letters. 47(2).
Published in Engineering, 2022
Authors: Hao X, Li Y, Fu S, Li Y, Xu Y, Kuang C, Liu X (2022). "Review of 4Pi Fluorescence Nanoscopy " Engineering. 146-153,11.
Published in Nature Protocols, 2021
Authors: Wang J, Allgeyer E, Sirinakis G, Zhang Y, Hu K, Lessard M, Li Y, Diekmann R, Phillips M, Dobbie I, Ries J, Booth M, Bewersdorf J(2021). "Implementation of a 4Pi-SMS super-resolution microscope " Nature Protocols. 16(2).
Published in Optics Letters, 2020
Authors: Li Y, Buglakova E, Zhang Y, Thevathasan J, Bewersdorf J, Ries J (2020). "Accurate 4Pi single-molecule localization using an experimental PSF model " Optics Letters. 45(13).
Published in Nature Methods, 2020
Authors: Zhang Y, Schroeder L, Lessard M, Kidd P, Chung J, Song Y, Benedetti L, Li Y, Ries J, Grimm J, Lavis L, De Camilli P, Rothman J, Baddeley D, Bewersdorf J (2020). "Nanoscale subcellular architecture revealed by multicolor three-dimensional salvaged fluorescence imaging " Nature Methods. 17(2).
Published in The Journal of Physical Chemistry Letters, 2020
Authors: Liao J, Jin D, Chen C, Li Y, Zhou J (2020). "Helix Shape Power-Dependent Properties of Single Upconversion Nanoparticles " The Journal of Physical Chemistry Letters. 11(8).
Published in Nature Methods, 2019
Authors: Thevathasan J, Kahnwald M, Cieśliński K, Hoess P, Peneti S, Reitberger M, Heid D, Kasuba K, Hoerner S, Li Y, Wu Y, Mund M, Matti U, Pereira P, Henriques R, Nijmeijer B, Kueblbeck M, Sabinina V, Ellenberg J, Ries J(2019). "Nuclear pores as versatile reference standards for quantitative superresolution microscopy " Nature Methods. 16(10).
Published in Biomedical Optics Express, 2019
Authors: Li Y, Wu Y, Hoess P, Mund M, Ries J (2019). "Depth-dependent PSF calibration and aberration correction for 3D single-molecule localization " Biomedical Optics Express. 10(6).
Published in Nature Methods, 2018
Authors: Li Y, Mund M, Hoess P, Deschamps J, Matti U, Nijmeijer B, Sabinina V, Ellenberg J, Schoen I, Ries J (2018). "Real-time 3D single-molecule localization using experimental point spread functions " Nature Methods. 15(5).
Published in bioRxiv, 2017
Authors: Li Y, Mund M, Hoess P, Matti U, Nijmeijer B, Jimenez Sabinina V, Ellenberg J, Schoen I, Ries J (2017). "Fast, robust and precise 3D localization for arbitrary point spread functions " bioRxiv. 1-16.
Published in Nanoscale, 2016
Authors: Li Y, Shang L, Nienhaus G(2015). "Super-resolution imaging-based single particle tracking reveals dynamics of nanoparticle internalization by live cells " Nanoscale. 8(14).
Published in Science Advances, 2015
Authors: Ishitsuka Y, Savage N, Li Y, Bergs A, Gru n N, Kohler D, Donnelly R, Nienhaus G, Fischer R, Takeshita N(2015). "Superresolution microscopy reveals a dynamic picture of cell polarity maintenance during directional growth " Science Advances. 1(10).
Published in ACS Nano, 2013
Authors: Li Y, Ishitsuka Y, Hedde P, Nienhaus G(2013). "Fast and Efficient Molecule Detection in Localization-Based Super-Resolution Microscopy by Parallel Adaptive Histogram Equalization " ACS Nano. 7(6).
Published in Biomedical Signal Processing and Control, 2010
Authors: Chen S, Feng X, Li Y, Zhou C, Xi P, Ren Q (2010). "Software controlling algorithms for the system performance optimization of confocal laser scanning microscope " Biomedical Signal Processing and Control. 5(13).